Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922165.1_cds_XP_016470959.1_63354
CDS Infomation

[gene=LOC107793184] [db_xref=GeneID:107793184] [protein=phospholipase A1-Ibeta2, chloroplastic-like] [protein_id=XP_016470959.1] [location=complement(80115..81707)] [gbkey=CDS]
Sequence

ATGCAAATCGGAGCAACACTTCCGGCTACAAACCTCCATTTTTTTCAGTCAAAAAGAGCC
AGTTTCAAATGCAATGGATCCCCATTAAACCCTAGTTTTTTGAATACACAAAGTGTAAAA
ACAGAGATGACAAGAAAACATCTCTCAAATCTTGAAAAAATCTTACAAAAGCAACCTCAA
AAAACCCAATCAGTCGATTCAAATGAAGTTGTTCAAGAATCGCGTAATGGGTTAAAGGAG
AAAAAGGGAAGGAATTTATTGGAAGGGTTGAATTTGGCAAGAATTTGGCCTGAACATAAG
GTTGCTGAAGAAATGTCACCAAGATATTTAAACAGGCTACAAAAAATGTTATCAAATAAT
AACATTGAATATTCGCCAAGAAATAGTCTTGGTAGTAGGTGGAAGGAATTTCATGGTAGT
AATGATTGGCTAGGCTTAATTGATCCTTTAAATGAGAATTTAAGGCGAGAATTGATTAGA
TATGGTGAGTTTGTTCAAGCAGCTTATCATTGTTTTCATTCAAATCCTTCAACTTCTTCA
GGAGAAGGGTTGTTACGCCCGAGACACGTGGCGTTGCCCGATAAGTCATATAAGGTGACC
AAGAGTCTGTATGCAACGTCGTCCGTTGGATTACCAAAATGGGTGGACGACGTTGCACCA
GACCTTGGATGGATGACTCAGAGGTCGAGTTGGATTGGTTATGTCGCGGTTTGTGATGAT
AGGTCAGAGATTCAACGTATGGGACGGAGGGATATTGTCATAGCTCTACGTGGCACTGCA
ACTTGTCTCGAATGGGGTGAAAACTTTCGTGACTTGTTGGTTCAAATTCCAGCAGAGACA
GAAACAGATTCAACTGACGGACAGGCTAAAGTGGAATGTGGATTCTTGAGTTTGTTTCAA
ACAAGTGGTGTTAATGTTCCAAGTTTAGCTGAATCAGTAGTTAATGAAGTGCAAAGACTC
ATTGAACAATACAAAGGTGAGAATTTAAGTATTACTGTAACAGGCCATAGTCTTGGAGCA
GCCTTGGCATTGTTAGTAGCAGATGAAATAAGTACATGTGCACCCGATGCACCACCCGTG
GCTGTTTTCTCGTTCGGGGGTCCTCGAGTGGGCAATCGAAGCTTTGCAGATCGATTAAAC
TCAAAAAACGTTAAAGTGCTACGTATCGTGAACAATCAAGATGTAATCACTCGAGTTCCA
GGGATGTTCGTGAGCGAATCACTCGATAAAAAATTAAGGGAGTCAGGAATTGCGAGTGGT
GTGCTAAATGTGCTTGACAAAAGTATGCCATGGGCATATTCACATGTTGGAACAGAGCTA
AGAGTTGACACAAGAATGTCACCATTTTTAAAGCCTGATGCAGATATTGCCTGTTGCCAT
GATTTGGAGGCATATTTGCATTTGGTGGATGGATATTTAGCATCAAATTGTCCATTTAGA
GCAAATGCAAAGAGAAGTTTAGCCAAGTTGTTAAATGAACAAAAGTCTAATATCAAAAGG
CTTTATACTAGTAAAGCAAAAGGTTTGAGCCTTAATCTTGAAAGAGAACATAGTTTCTCT
ACACCTAGTTGTTTGCCTAGTCCATCTTCTTGA

Peptide Sequence

PEP ID

XP_016470959.1
PEP Infomation

PREDICTED: phospholipase A1-Ibeta2, chloroplastic-like [Nicotiana tabacum]
Sequence

MQIGATLPATNLHFFQSKRASFKCNGSPLNPSFLNTQSVKTEMTRKHLSNLEKILQKQPQ
KTQSVDSNEVVQESRNGLKEKKGRNLLEGLNLARIWPEHKVAEEMSPRYLNRLQKMLSNN
NIEYSPRNSLGSRWKEFHGSNDWLGLIDPLNENLRRELIRYGEFVQAAYHCFHSNPSTSS
GEGLLRPRHVALPDKSYKVTKSLYATSSVGLPKWVDDVAPDLGWMTQRSSWIGYVAVCDD
RSEIQRMGRRDIVIALRGTATCLEWGENFRDLLVQIPAETETDSTDGQAKVECGFLSLFQ
TSGVNVPSLAESVVNEVQRLIEQYKGENLSITVTGHSLGAALALLVADEISTCAPDAPPV
AVFSFGGPRVGNRSFADRLNSKNVKVLRIVNNQDVITRVPGMFVSESLDKKLRESGIASG
VLNVLDKSMPWAYSHVGTELRVDTRMSPFLKPDADIACCHDLEAYLHLVDGYLASNCPFR
ANAKRSLAKLLNEQKSNIKRLYTSKAKGLSLNLEREHSFSTPSCLPSPSS

Transcript Sequence

Gene sequence data has not been registered.